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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71280718, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKKFLLILT TAITINCLCL VGQASAAQYS PNFKGTEITE FVNIVGKNLK KTMIVDPNVR  60
   61 GKINVRSYDL LSEKQYYQFF LNVLEVYGYA AVEMDNNIVK IIRNKDAKTA AIPVVGNKSN 120
  121 IIGDEMVTRV VEVKNVTVRE LVPLLRQLSD QAGGGNVVNY DPANVIMLTG TASTVNRLVK 180
  181 IIERVDRAGD QDVEIIKLKY ASAGEMVRII EAMNKPSGGK AGQPTFLIPK IVADDRSNSV 240
  241 IVSGEVKARE RVARLVKRLD SELESNGNTR VYYLKYSKAE DLVKVLQGVS DSIASETTTA 300
  301 KTKTRSSKKR DVSIEAHEST NALVITAQPD MLRSLEAVIR QLDVRRAQVL VEAIIVEVFE 360
  361 SDGVSLGVQW YNEAGGFTQF TNGPASISSV AAGVQAAEGE PATKVTTIDA NGNPVISENP 420
  421 STDGDYSILA QVLGNVSGMM FGIAKNDWGA IVSAVSSDTN SNILATPSIT TLDNEEAYFI 480
  481 VGQEVPIITG SATGSNNANP FQTVDRQEVG IKLRVTPQVN EGNAVQLIIE QEVSSVSGTT 540
  541 GVDISINKRE IKTTVMADSG DTVILGGLID EDVQESVQKV PILGDIPIIG HLFKSTSNST 600
  601 RKRNLMVFLR ATIVRDSALM TEISESKYNY IRADQIRKHE EGLSLMSNEN MPILPQWQDN 660
  661 LTLPPSFNEY QQKLEDKGTE LPKPPVTTEG VAAEEKQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle