YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71146407, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLFKPTLVA LALFAVVGCN EKAVEEVKAP VLDTEVQKQA YGLGASIGMY MQRNLEEHDK  60
   61 LGLTLDKELI VRGFVDSIDG KSVIEKEEIQ ALLMNLDTSM KEKQQAAAIA ASESSLADGA 120
  121 KFLEDNAKKE GVTVTESGIQ YEVLTAAEGD TPLATDTVKV HYKGTFLNGE TFDSSYKRGE 180
  181 PAVFPLNRVI KGWTEGVQLM PVGAKYKFTI PSDLAYGPNG NPPSIPGNSV LQFEIELLEI 240
  241 QKAEEAPKAD EHAAH

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	255	0.99