YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71280664, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFDASQFDN LELDNIGQWP AAAKLLLAVF LAVMVGFLGY MGLISDQMKE LDRVSYEEKT  60
   61 LKESYRAKYH VAANLDLFRA QMVEAEDTFA NQLRSLPNSH EIPGLLDDIT FVGTTSGLDF 120
  121 VKLEWQPEIS KEIYIELPID IEVIGPYHSF GQFVSKIAGL PRIVTLHDFK ISISQSDSEI 180
  181 LNLKLQAKTY RYQEEAAK

Type	Start	End	Confidence
Non-Cytoplasmic	1	20	0.61
Transmembrane Helix	21	44	0.90
Cytoplasmic	45	198	0.62