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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71146355, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIESILRFSI ARRWLMMTMI FVLIGLGYWS YQKLPIDAVP DITNVQVQIN TRAPGYSPLE  60
   61 TEQRITFPVE TALTGIPNLS YTRSISRYGL SQVTVVFSED TDLYFARNLI NEKLSAIKNK 120
  121 IPAGLEPEMG PISTGLGEIF MYSVVASPQA VKADGLSYDA TALREIQDWI IKPQLALVPG 180
  181 VTEINTIGGY DKQYHITPLP KKMLEFSISF NDINVALSNN NSNRGAGYIE QNGQQLTVRS 240
  241 PGQLANINDI EQVIVKVIDD TPVQISDIAQ VAIGKSLRTG AATSAGKEIV LGSAMMLVGE 300
  301 NSRVVALAVA KKLEKIKLSL PKGVIVESVY DRTTLVDKAM YTVQKNLVEG ALLVIIVLFL 360
  361 LLGNVRAALI TAAVIPLAML ATITGMVKTG VSANLMSLGA LDFGLIVDGA VIIVENSIRR 420
  421 LSDAQKLQGG ILSRKDRLHV VYSATNEVIR PSLFGVFIIT IVYIPLFSLT GVEGKMFHPM 480
  481 AATVVMALIA ALVLSLTLVP AAVALFMKGK ISEKESPVIS AAKSVYKPLL IGAMKLRWII 540
  541 LLACAALVAF SIWLATTLGS EFIPQLNEED LLLQAIRIPG TSLSQSIEMQ KALELKIQQY 600
  601 PQVKNVFSRI GTPEVANDPM PPNIADTYVM LIPRSQWPDP KLSHGELAAQ IVVSVSGQPG 660
  661 NNFELTQPIE MRFNELISGV RADLGIKVIG DDLNQLLKSA NAIREVIEKI EGASDIQVEQ 720
  721 VTGLPMLSIH PKRVELARYG LNVSQLQYAL STAIGGEKAG VIYEGDRRFD IVVRLPEQVR 780
  781 QNVNRLSELP IALPNGNYVP LSEVAILELA PAPNQISREN GKRRIVVTAN VRGTDLGSFV 840
  841 KNAKQQIQDN VEIPAGYWLE YGGAFEQLES ASKRLTIVVP LTLALILGLL IMAFGNLKDA 900
  901 LIIFTGVPLA LTGGVLALWF RGMPLSISAG VGFIALSGVA VLNGLVMLSF IRDLCKERGE 960
  961 LMSRIIDGAM IRLRPVLMTA LVAGLGFVPM ALNIGTGAEV QRPLATVVIG GIISSTLLTL1020
 1021 FVLPILYRIA HQSDFKRA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle