YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71280575, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYTQSNCEK NTPKKTSNTY HQLKLSLGMT LIELMVGIGI TSILTTIALP SFNDFIVQLR  60
   61 VDNEISRLSR LLLTARNHAI NSGDNVILCP LEDNGTCSVK WHEELSVFID TNNNQQFDIA 120
  121 NNELLITTKS PITSGDILIY AKNRNRITYQ ATGHLFGLSN GTLRYCPKDY EEKSRAIVVA 180
  181 RSGRFYATTD NNNDGQDETR SNQKIICD

Type	Start	End	Confidence
Cytoplasmic	1	26	0.82
Transmembrane Helix	27	49	0.82
Non-Cytoplasmic	50	208	0.91