YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71146279, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILTKLLVL CALTLSLFVT TSASAETFTF TAIPDADESQ LRTRFEKVAL YLEEQLGVEV  60
   61 KYVPVKSYSA AVTAFRNNQV QLAWFGGLSG VQARRLVPGS QAIAQGYEDQ FFKSYFIAHY 120
  121 STGLEMSYSF PDITETTFTF GSKGSTSGRL MPQYYIEQHL KKKPQQAFKR VGFSGDHNRT 180
  181 IVQVQSGTYQ VGAVNYKVWE SALAAGKIDT NKVKVIWKSP TYPDYQWTIR ADVEANFGPG 240
  241 FADKVQAALL TMDSPALLDS FPRSSFVKAK NEDFQPVEDV AKQIGLID

Type	Start	End	Confidence
Signal Peptide	1	25	0.99
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	288	0.99