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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71280402, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQDIFEEIID YLKGIWLKRR YIIIATWLIC PIGWYFVAAM PNVYQSEARV YVDTQSLLRP  60
   61 LLKGLTVETN PDTQIRLMVK TLLSRPNLER ISRMTDLDVQ ASTPAQYEAI IKNLKDNIKI 120
  121 SSARRENIYT LSIEDEDPEM AKNIVRSALT VFIENTLGET RSDSDSAQKF LNTQIKDYEN 180
  181 RLSNSEARLT SFKQKYSGIL PDQSGGYYAK LNGNREKLKA IELDLLENKT RLDSAKKQLA 240
  241 QSVVADTGSD NKIKSENSIQ TTYDDRINEL EVLLDNLKLR YTEKHPDVIE TSRNLEHLNK 300
  301 LRSSEIEKYL AQNNENTGSL KRLSANPVIQ EVQIHVNQLE NLIASLNVRA DNYRQRIIEL 360
  361 ENRVHTLPEI EAELIALNRG YGITKEKYEE LLSRKETAQL AQQADETTDK IQFRVIDPPR 420
  421 KATKPSGPKR FLLFGVVTLI GFAVGIGLSL LMSQLNPVAT STAQLSKITG VPIFGVISAN 480
  481 ENLGLQQWHK KKTFIFIGSN VLLLCLLVLF VSYFLFPDTI QAPLKRIF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle