YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71146050, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLESTPLQST TLKGKTALIT GSTSGIGLAS AHVLAEQGIN LVLHGLMSDD EGANLAQEFS  60
   61 EKYQIKTLFD NANLMDTSAI SVFMDKATKT MGSIDILINN AGIQHTEAVD TFPESKWNAI 120
  121 IAINLTAAFH TTQHALSGMK ANSWGRIVNI ASVHGLVASK NKVAYCAAKH GIVGLTKVVA 180
  181 LECAEHGITA NAICPGWVDT PLINDQITEI ANKESTSFEQ AKYQLITAKQ PVPDMMAPRQ 240
  241 IGEFILFLCS DSARSITGSS LPMDGAWTAQ

Type	Start	End	Confidence
Signal Peptide	1	35	0.85
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	270	0.99