YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71145987, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIQKYTGLK RVYFALLNSF RGFVWLINNE SAFKQEFIIS AMLTLFSFYL SIDALVQLLL  60
   61 VSVLGFVLVI EIVNTAIEVA IDRIGLEHHP LSGLAKDLGS LAVLFSLFVA LAAWSVVLWN 120
  121 I

Type	Start	End	Confidence
Cytoplasmic	1	11	0.78
Transmembrane Helix	12	27	0.61
Non-Cytoplasmic	28	44	0.49
Transmembrane Helix	45	77	0.72
Cytoplasmic	78	97	0.60
Transmembrane Helix	98	118	0.93
Non-Cytoplasmic	119	121	0.62