YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71280201, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNFFIAIIS LLLILAVSSV FVIYEGQRGI VFQFSKIKRD SATDEMMVYE PGLHFKIPFI  60
   61 ETVRKLDARI QTLDEPADRF VTSEKKDLMV DSFVKWRIVD FSTYYLRTSG SVDNARALLK 120
  121 QKVNNGLRTE FGNRTIKEIV SGDRDAIMSK ALESAASSRE DLGIEVVDVR IKAINLPTEI 180
  181 SQSIYERMRA ERTAVAKEHR SQGQEQAEII RATIDAKVTV MLAEAQKNSF TVRGEGDALA 240
  241 AKVYADAYSK DADFYSFYRS LEAYEKSFNS KNDIMVVKPD SEFFRFLKDG SDVKK

Type	Start	End	Confidence
Signal Peptide	1	19	0.95
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	295	0.99