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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71280187, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFMSKCSVL TAISLACITS QVSQAGGVEL TEKLTAKAAT LAPYQQRDFQ EEVFYFVLPD  60
   61 RFYNADTSND LGAAENDKKR AVSRGGLDKT HKGMYHGGDL AGLTEKLPYL DNMGVSAIWL 120
  121 TPILRNRAMQ AGTSGYHGYW ILDFTEIDPH LGSNAELKNF IDQAHKRNIK VFFDIITNHT 180
  181 ADVIKTKECH GEDGLGWIVD VSKGNDCPFI SMAQLAQGKY YTPLIPKGDE TLKYPAWLND 240
  241 MDVYHNQGDS FWRGESSVRG DFAGLDDLYT QKSSVVNGMI AIYQDIIDEF KPDGFRIDTV 300
  301 KHVNIEFWQQ FSPALMQHAK AQGIDNFFMF GEVYSFEPEL LSRFTTEAKI PSVLDFAFQG 360
  361 AMTKALVEQQ GTDVLAQLFA KDHFYNTEHK YIRNTNANQL VNFTGNHDMG RFAFSLKQSS 420
  421 HNYSEQAQIQ RNLLAHAMMF FSRGVPVIYY GDEQGFVGDG GDQASRQDMM PSFVDSYNDD 480
  481 DLLATTKSTA DDNFDTNHLF YQSFAKYAQL YQQYPALRFG EQAVVYSQNE AGIFAITRQT 540
  541 KATNNTNAQS LLVVFNTAIN AQSLNLVSEK IGVKQAETTL LYRSVESGKA DEIAPLSFAI 600
  601 YQLK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle