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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71145900, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITAIENFFK NNNVNVVKSL FGILLISTFL LANLPLKALA ANQISQQQME QFKKLPPSQQ  60
   61 EALAKSMGVD LNSIKGQLSK GGSSEEKKNT ETFPRGTQFD AEGNPISEEE LEKLENSDEL 120
  121 KPFGYDVFAN SPQTFAPMMD IAIPADYIIG PGDNISIQVF GKEKDELELT VNREGQIIFP 180
  181 SHGPFTVSGL SFNEMKRLLT ARIKEKVIGV DVVVGIASLR SMRVFVLGDA HKPGPYTLSS 240
  241 LSSITHAIFA AGGISDIGSL RNIQLKRAGK LVTTLDLYDL LIKGDSRSDV LLQSGDVIFI 300
  301 APKGNTISIE GEVRRPAIYE LSQNENFNDV LAMSGGLLPT AFAKTTRVER YNQDSLRTVV 360
  361 NIDLTKKNDL AKKAHAGDAV YVMKAAEMFE QSITVIGAVT RPGKYQWQTG QRITDIFPNI 420
  421 DSHLLHSADL NYSIVVREID IARNIEILQF DLAKAISASN SKDNIILQGN DKIIVFANII 480
  481 KLIDSKINLD SLAFTQDNLT KKEQDLAKEK YKQKQFWLKY GDSEQVAQFD SEEAAAAKLV 540
  541 EQSIAQFSGG ELEEELDPKE LTIFSRQRLL MPIIEKLKRQ GKSGQPIQLV EADGEVKFPG 600
  601 IYPLAKNARV SDLIAAAGGL TESAYVVRAE VSRNQIINNR AQQTSLMFSL SGALAGDEKD 660
  661 NVILNSKDRL NIHQVPAWSE NSVVELRGEF VFPGKYTVRR GESLADLITK AGGFTKFAHQ 720
  721 EGSVFTRVQL REIEQQNLLK LTADLRIEMA SKSMSDQNYS QSYAEVQQML ADMANVQPVG 780
  781 RLVLDLPRVM NNKSYDVLLE GGDVLYVPTL KNSINVVGQV QVTSSHIYDI NLSADDYLSQ 840
  841 SGGSKKRADE DRIYIISANG SIKMMDSGNW FSSDSGDNLR PGDTIVVPLD AEYMNNLALW 900
  901 TSVTGIIYNS AVAIAAISGI 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle