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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71145859, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNLPLNLIT LTILTTTNAF AEGSKNSDVE KIEVQGTYIE GYGAHEVSGA SRLDLSIIEI  60
   61 PQSVSVITSA QMRDFQLSDI NAALDSATGI NVERIETDRT YYTARGFDVT NFQIDGVGLP 120
  121 LTSGNNHADE DTAIYERIEV IRGANGLMTG VGNPSATINF IRKRPTEETE VSVRGTVGSW 180
  181 DKTRLEVDAS TPLTDKVSAR VVLVKQDNES YLDRYEQDKS VAYAFIGAEL TDSTYLSISH 240
  241 SYNQSDAIGN NWGANPLYYT DGSATDYDAS TNTSANWSNW QVVKNNTVVE LAHYFNSQWS 300
  301 LRATYSHKTT DEDTELFYVY GTPDKNTELG LLGYASEYDL DDKHNLFDAY INGEFSLFGR 360
  361 EHQIVAGINY AKMSYVDKSL YDYTTGNGFP VMPPLPEWDG NTPKPIFTDG LTGSDVTNEQ 420
  421 KAAYFTARFE VLDNLHVIAG GRYNDWNVEG NSYNVVQDAS DKEFIPYLGA VYQITPELVA 480
  481 YTSYTETFVS QTKLDINDKI LAPITGESKE IGIKSEFFDG LLIGSIAYFD VQQTNVAKLD 540
  541 VRTTDLPINL QRYIGAEGIS SNGFELEVAG QIYDNLQLSF GFTDFDISGD DVVADYTPST 600
  601 LIKLAATYTV PAIEGLSIGV NMNWQDDISR KQGVVGDGFA NAGEEIVTKQ GAYAVVNVMM 660
  661 AYAITDNVSL SLNANNITDE KYINSLYWAQ GYYGAPANYS ATLSWSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle