YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71280088, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFLIELWES VRGFIATGGN VLYVVAFALL LMWILMIERY WFLASVYPTM RDDIIARWDA  60
   61 RRDTTSWYAH RIRETWISEA DELLEQRMIT IRTLVAMCPL IGLLGTVTGM IGVFEVMAEQ 120
  121 GTGNPRLMAA GISQATIPTM AGMVAALSGV FFSSRLDAKV KLAKAKLVDS LPHH

Type	Start	End	Confidence
Non-Cytoplasmic	1	13	0.93
Transmembrane Helix	14	37	0.86
Cytoplasmic	38	92	0.94
Transmembrane Helix	93	114	0.92
Non-Cytoplasmic	115	131	0.85
Transmembrane Helix	132	154	0.88
Cytoplasmic	155	174	0.94