YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATPF_COLP3
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDINMTLVGQ LIAFVVFVIF CMKYVWPPII GAIEDRQATI ADGLAASDRA AKDLELAQEK  60
   61 ATAQLKEAKV QAASIVDAAK KHEAKIVDEA AGKAQVEKER ILASGHAEIE TERNRAKEEL 120
  121 RKEVAVLAIA GAEKILERSI DAAAHSDILD KLVAEL

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.67
Transmembrane Helix	7	26	0.91
Cytoplasmic	27	156	0.68