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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71280023, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITVKTKNKT HLGLLLSTAA LLGSNVALAQ ADKPKLILQI TVDQLRGDMP TAYLDKMGKG  60
   61 GFRYLLDEGI VYKDAHHNHA NTETIVGHAT LATGALPAVH GMIGNVWFDD KLQRLVYNVE 120
  121 DANYPLLSAD AGVNQKTEID PTQRTAKSSG RSPNNIQVST FSDELKIASN GKAKVFGVSV 180
  181 KDRGAISMAG HMGKAFWFSK KSGEFVTSEY YYDKYPEWVT NWNEAKPTKK YHQKPWQLSQ 240
  241 PQAKYVFAKQ DDQAWETKFP GFGRTFPHQY GDMSNAYFNT FLTLSPAGDE LTLDFAKAVV 300
  301 NNEQLGQDEV TDYLSVSFSS TDYVSHIFGP SSLEAEDNML RLDRTLANLL TFIDKKVGLE 360
  361 NTLIVLSADH GAAEVPAYLS SLGMKTDVVA PKEWDKAPSM KALKKQFGFD TALIKSYFHP 420
  421 YIYLDRDLIA ERKLSLKQVQ KAVAMEVSKF DGVALAVTSS DIETGNTPQD YLHTLVVNNH 480
  481 SKNRSGDVYV VLEAHRFVAD MEGLTVAATH GSPWGYDTFV PLIFAGFNID DDKVYRRVST 540
  541 TDIAVTLSAV LGIKAPSGAQ GQILEKVLDK D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle