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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71145738, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIQKPMKAI QSIISVVVLM TTLGCSQQYE AVNTVQVALP NQEKFRLILG GTDVGGMLVN  60
   61 RNAENIIIDY SYSNNGRGSS SKEVLKLSDT GLPIDWRITG KTVFGNEVDE QFSLQDNMAY 120
  121 WQSTAEKGSA KFNNSAIYIA QNASPYALYI YATALLEKPN HSLSALPSGE LTITQVDKVD 180
  181 LKDISGVLVN ATIYAINGIE LDPSYIALDE NQHMIGYLSP RAVVIREGLE QQSKILSDLA 240
  241 ASLNASRFEK IAKKTTHLYE KPVRINNVRI FDPVNMQLTD SQSVLIEKDK ITAIEPLVDI 300
  301 PKEGEILIDG NGGTLIPGLY EMHGHMSDND ALLNVMAGVT SVRDMGNEIE ILDPLIEKIE 360
  361 SNQIIGPRIT KSGFIEGKSE FSAATGEIAS TEQEAVDLVN TYGEKGGYFQ IKIYSSINGE 420
  421 WVPAMAKAAK KHGMRVTGHI PAFSTVDEMI AAGYDEITHI NQGMLSWVLD RDEDTRTLYR 480
  481 ITGMKRFVDL DLNSEKVQNT LNTMVEKNIA VDPTIVIHEF GLTARNGKTR IGTKDYIDNM 540
  541 PVGVQRQAKV GLLNVADQEE DKAYQLAFDK VIETLALMHK KGIFLVPGTD LGGAFELHRE 600
  601 LELFKKIGMS NVEVLRRASY DMANYLGYGD QLGSIEVGKL ADFFLVPGDP TADLRAIKTV 660
  661 SMVSKGGVIY FPSEVYPEFG IKPFTTIPTI VESN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle