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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71279822, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.84
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNFLIKFSL TQRLFVCIFV VITLLVGAKS WLSIPIDAFP EISPTQVKIV LKLPGMNALE  60
   61 IESQVTRVIE TELLGIPSQE MLRSTTKYAI TDITIDFEEG TDIYWARQQV NERLVNILPS 120
  121 LPSNISGGMA PMSTPLSEVF MFTVENPTLS LTQRRELLDW HIRPLLRTVS GVADVNSLGG 180
  181 YVKAYEITPD ILLMQQYNIS FNELETAITA TNQNGGVGRL VKGNDTLILR TEGKFENIDS 240
  241 LKNAVIKTTN NKVIKLHNIA TVSIGSLTRY GGVSKNGEEA VQGLIIALKN SNTAKVVENV 300
  301 KSKLQTIEAS LPTGTKINVF YDRSNLINTA INTITNALSQ AVILVIVLLA IFLGDIRSSL 360
  361 VVALSLPMSA LMTFILMKEF DLSANLMSLG GLVIAIGMLV DSSVVIVENI VNRLSSNQHL 420
  421 PRLHVIYRAC KEVATPVFSG TIIIIIVFSP LLMLSGLEGK LFTPVALTIV FAMLSALLLS 480
  481 LTIIPILASL LLKNEPVKQP KIVTLLQHFY SKTLRKTINK PAAILVLSVS TFIISIILFQ 540
  541 GLGKSFMPVL DEGDIIVQLE KSPSISLSSS VDIDEQIEKT LLKSTPEIIQ IVARTGSDEL 600
  601 GLDPMGLNET DVFMELAPKS TWRFNTKSEL IEDIRNTLTN YPGMNIGFTQ PIQMRVSEML 660
  661 TGGTGDISIK VFGNDIAILT SLAEEISGLA NKIQGASDVQ MALIEGGKYV NIKLIPEVAS 720
  721 QFGLSTQALS HYLKYQLEGL QISSLLDGNH AIPIVFNRAK ETSSTADEIS SIHALKQKLI 780
  781 LMPSNVLLPL EQVANISMKN GPLLIEREKG NRFSSVSANV VNRDVVSFVD ELNMKIQNEI 840
  841 TLPSGYTLTF GGEFESQQRA TKNLLLLIPI ALILIFIILF TTFNSLSKSS LIIANIPFAL 900
  901 MGGVIALYVS NEYLSVPASV GFIALLGIAV LNGIVMISYF EQTKQFAESL HNRIIDGAKR 960
  961 RLRPVLMTAT TAMFGLLPLV FATGPGAEIQ KPLAIVVIGG LITSTVTTLY LLPLFYCWLE1020
 1021 KRNA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle