YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71279813, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKRTDLKSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPDM  60
   61 ADATYIEPIH WEVVRNIIEK ERPCAVLPTM GGQTALNCAL ELEAKGVLKE FNVEMIGATA 120
  121 DAIDKAEDRS RFDKAMKAIG LDTPNAEIVH TIEEAHAASK VLGFPCIIRP SFTMGGTGGG 180
  181 IAYNIEEFDE ICTRGLDLSP TSELLIDESL IGWKEYEMEV VRDKNDNCII ICAIENIDPM 240
  241 GIHTGDSITV APAQTLTDKE YQIMRNASLA VLREIGVETG GSNVQFGICP ETGRMVIIEM 300
  301 NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDELSNDIT GGKTPASFEP TIDYVVTKIP 360
  361 RFNFEKFAGA EDRLTTQMKS VGEVMAIGRN QQESMQKALR GLEVGVNGFD SIVDVTQPGA 420
  421 KTKIMHELQE AGADRIWYVA DAFRLGLTVE DVYRTTMIDR WFLVQIEDIV LEEAKVSEGG 480
  481 LKILNPEYLR KLKRKGFADS RLADLIGVSE AEVRKKRHNA DIYPVYKRVD TCAAEFSSDT 540
  541 AYMYSTYDEE CESNPTDKES IMILGGGPNR IGQGIEFDYC CVHAALALRE DGYETIMVNC 600
  601 NPETVSTDYD TSDRLYFESI TFEDVLEIVR IEKPKGVIVQ YGGQTPLKLA RALEAAGVPI 660
  661 IGTSPDAIDR AEDRERFQQA VDRLGLLQPE NATVTSLEEA MAKAEGIGFP LVVRPSYVLG 720
  721 GRAMEIVYDL DDLRRYMTEA VSVSNDSPVL LDHFLDDAIE VDIDVVCDGT DVVIGGIMQH 780
  781 IEQAGVHSGD SACSLPAYSL SQEIQDVMRK QVTDLAFELG VIGLMNTQMA VKDNEVYIIE 840
  841 VNPRAARTIP FVSKATSVPL AKVGARVMAG KSLKEQGITK EVIPKYFSVK EVVIPFNKFH 900
  901 GSDPLVGPEM RSTGEVMGVG DTFEEAYAKA NLGAGVSVPK TGRALISVRN SDKKRVLELA 960
  961 KIMVDLGYDI DATHGTEVIL REAGVPVRRV NKVHEGRPHI LDRIKNSEYS YIINTTEGRK1020
 1021 AIEDSKVLRG GALRYKVAYT TTLNAAFASC MAHAADEMST VRTVQELHNT L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle