YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71145513, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSQKSVLRV IVLASVSMVL VACGGSESTE PGEVLLSCDV PMVSDAAGTS CVAPEPIECP  60
   61 VPTVPDALNE SCVVGIDPKA PEPIIFAGEN QALLFYNRAD GEYSDYKMHN WNSAECDAYA 120
  121 ADSLAPSWDN GLAHTGVDPV YGAYWLLNLK DDHNECGHFI IHKGTDDAGK EFGGGDFKMP 180
  181 LFQDDETYQR MNFTFSGVAS IFEYPVVTLG KQALAISGFS AHWIDSNTFT WNVNFDLVTS 240
  241 VKLHHSATAG IGADEANEDV ITGTVVELSE VDLTDEQKAA APLVADWPAF SGNWSIEEAK 300
  301 AIAKNQLVLV GYNAEGLAVA ATNVQADLVL DDLYTKGEMD ANEATLGVVY DNGTVKVSVW 360
  361 SPTAQQLKLN VYNADKEMVS SHDMTEDSMT GVWSYTGDAS LDRQFYRFAL TLYHPENKAI 420
  421 EEIESTDPYS LSLSTNGEYS QFVNLSDEDL QPEGWDGHAV STIENYEDAV IYEGHIRDFS 480
  481 AQDESTSVEN RGKFLAFTEI NSAPMQHLQK LVANGLTHFH MLPANDIATI DEDADKIIDL 540
  541 DSTVLALCKV NFKAPPCYQN LDDQTLRAVF ESYSPYSNEA VKLTEAMRDT DSFNWGYDPK 600
  601 HFNVPDGIYA SNPDGVSRIK EMRAMIKSLH DIGLRVVLDV VYNHTNSAGL WDNSVLDKFV 660
  661 PGYYHSRDVT TGAVQNSTCC SDTALEHRMM DKLMVDSLKQ WTEQYQFDGF RFDIMSQGSK 720
  721 EQMLAARDAI QAIDPDNHFY GEGWYKDSRG FERADQENMA GTEIATYNDR IRDGIRNATL 780
  781 FNNESDSDYP FEQQDIVKFG MAGTQTDYVL KTFKGTDVVG SSAGMYAKDP ADIINYVSKH 840
  841 DNETLWDILQ FKLSPEMNNS ERVRAQNISQ SIVLLSQGIP FLQMGGDFLR SKSLDRNTYD 900
  901 AGDWYNLVDF TFELNNWNKG LPLDNGGRDY DDIVSLASSS SSTVSMTDIL FASNVFNEFL 960
  961 SIRTSSPLFR LTTATDIINR VGFHNIGKNQ TQGLIVMSID DGSTLTDIDP NYDALVVVVN1020
 1021 GTNSEQTHTI ASASNFTLHP LLAGSVDGTV ASATFEQGTD EGSFTVPPLT TAVFVKVQGE1080
 1081 SQASGLSAYV TAGAPDVVPY GDTVAYVRGE MNGWNPDDAF TYIGDGVYQA KITLAAGSYG1140
 1141 FKVADFDWSS NINLGAPGSG GEVLEDQTFN LLPGSNDNLS ITVAIDGTYF FTLDASNTDA1200
 1201 PTLLVENEEP FVGTPIFIRG DMNGWGEDNE LIYIGNGKYQ ATITISVSTP SFKIASADWS1260
 1261 TVNMGAPADD MEITEGENQL LLSGSGDNFS MNFTVDGDYT FVFDASDLAE ATLSIYSAEI1320
 1321 FGATPVFIRG DMNGWGEVDQ LSYAGASSYS VELNLTAGDY GFKIASGDWS TFNLGAPADT1380
 1381 SVVALDSPLT LLQNSQDNLS VTIVDDGVYI VTVTGPDPTT PTINISKKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle