YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71279753, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATFQRETSH QLKGHKKVIK NRVNPSVLFL LVTALASIAI SNNAMSADTH GHKDEHTDEH  60
   61 KSEHKDEHGE EEGHIEITKV NAQKAGIINA TAGTGQIKQT TTVYGKAVID SSAISQVRAR 120
  121 FPGLITKLTV NVGDNVTTGE NIAQVESSDS LTRYNITAPI SGVITKRHAN PGDLTNQQPL 180
  181 LTVENYKQLW VQYKIFPSQR QAIHTGQQVT ISSTAATTQS SIMHLMANKN QPFIIARVPL 240
  241 DNSKGSWAPG QLLTGSVVTH QVDVNLVIDN RAFQSVEGKN IIFVTNKGGY ETRELTLGQT 300
  301 DGQFSQVISG LKAGEQYALI NSYLLKADLG KAGAAHAH

Type	Start	End	Confidence
Signal Peptide	1	46	0.96
N-region	1	37
H-region	38	43
C-region	44	46
Cleavage Site	46	47
Non-Cytoplasmic	47	338	0.99