YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71279715, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.56
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLVYIIRQK VSNMAWKLDS NIFKRYYIDT LKSISCCDLC GANVSDSYLL GYSLSQALLC  60
   61 QSCVNDLPYF NQSLIAGNLL RWPAVHRALP NIHFEQLFAL SPYIYPFNKW LAQMKYLGRF 120
  121 ELASLFSVLL CAQWQAMIMN QTIIPINLVL AVPLHIKKWQ VRGYNQAHLI AKTFAETLSL 180
  181 PYDANLVLRV KNNDSQMGKT GSQRRKNLAN AFALQRKLGS HIKHVLIVDD VVTTGTTVSE 240
  241 ISKLLKQAGV ETVTLVTVCL TVPNAKDNGP VIS

Type	Start	End	Confidence
Cytoplasmic	1	116	0.51
Transmembrane Helix	117	137	0.47
Non-Cytoplasmic	138	273	0.83