YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71279703, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNVVTSAGR NGVHDFILLR ASAIILVLYT LLLAGFFVVT PSVTYDVWQG FFACMSVKVA  60
   61 TVMALLALLV HAKIGVWQVL SDYVKPAFLR GALQFIFSVT LLAYLMFGSL TVWGV

Type	Start	End	Confidence
Cytoplasmic	1	15	0.96
Transmembrane Helix	16	39	0.90
Non-Cytoplasmic	40	48	0.79
Transmembrane Helix	49	72	0.85
Cytoplasmic	73	90	0.77
Transmembrane Helix	91	111	0.90
Non-Cytoplasmic	112	115	0.76