YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71145427, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFSRELFSF LLLRLGVIIV ISALWQGLAW VIASPDFPSL FAVINSVQFH LNEGEMVTNI  60
   61 LITLRRVLLS FIIAMLLGGI IGIMMGVNAR INKLSDSLLI IMLNIPALVT ILLCYIWFGL 120
  121 VESAAIAAVV INKIPTVVVM IREGARAVDK DLLAVAKIYQ LSASKTFFNV FLPQLYPFII 180
  181 ASARSGLSLI WKIVLVVELL GRSDGVGFAL NTLFQFFDIA GILAYTLVFV VIILLIEALI 240
  241 FKPFDKLVAR GTRFD

Type	Start	End	Confidence
Cytoplasmic	1	9	0.96
Transmembrane Helix	10	32	0.92
Non-Cytoplasmic	33	66	0.89
Transmembrane Helix	67	87	0.94
Cytoplasmic	88	97	0.77
Transmembrane Helix	98	119	0.91
Non-Cytoplasmic	120	123	0.71
Transmembrane Helix	124	142	0.48
Cytoplasmic	143	165	0.47
Transmembrane Helix	166	195	0.52
Non-Cytoplasmic	196	218	0.60
Transmembrane Helix	219	241	0.88
Cytoplasmic	242	255	0.76