YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71145422, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFKYSETAT PYSKHTSGFT LIEIIIGIVA LSISLSIVST LIAPAEQKSA DQIHQVKAAE  60
   61 LGQSFLNDIS ARAFDQNSDM AGGLVRCGEP NDGSNPCTDS GKLGPEDGND GRPNNGEVKR 120
  121 GLFNDVDDFH NYSEKFTGND EILAKGYNNF TIDIKVIYDG LSLGLSNNRS AKKITVSVTT 180
  181 PLGTEIQFAT HKANF

Type	Start	End	Confidence
Cytoplasmic	1	18	0.69
Transmembrane Helix	19	43	0.86
Non-Cytoplasmic	44	195	0.74