YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KAD_COLP3
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIVLLGAPG AGKGTQAQFL MAKFGIPQIS TGDMLRAAIK AGSELGNKAK AVMDAGQLVS  60
   61 DDLIIGLVKE RVAQEDCKAG FLLDGFPRTI PQADAMKESG IVVDHVLEFD VPDEVIVERM 120
  121 AGRRVHSGSG RVYHLVYNPP KVEGKDDVSG DDLSIRPDDE EATVRKRLAI YHEQTKPLVD 180
  181 FYQAEAKSGS CSYLTIDGTQ AVEKVNQLLS AQLA

Type	Start	End	Confidence
Signal Peptide	1	17	0.89
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	214	0.99