YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71279559, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNLQNMKKS VQKGFTLIEL MIVVAIIGIL AAVALPAYKT YADKAKFTEV VLSATAAKTA  60
   61 VDLCIQTGKG GLVSSTTPAT MLLEAAKCET IPDVTGWSQS GMVTSVKISG TTLVGPYLVT 120
  121 VIPAVQGSFD ATHTYVLTAT VGNGTAVWNH SGGCVAAGYC

Type	Start	End	Confidence
Cytoplasmic	1	14	0.68
Transmembrane Helix	15	37	0.75
Non-Cytoplasmic	38	160	0.75