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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71145272, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRLPLIIGM GGINASGRTS FHQGFRRIVI DKLTAQARQE TFVGLASLMK IVTKKDGALV  60
   61 DGDGNLVLAE EIESKFGQKI LAGTLIRKIE KNHFDPDATH WHQKMNVTPT DKPIAFELRA 120
  121 KELPQPVPSS WLVTDLGAGR VSVEIPEQLT ITHDSYRDNP IKAAGQFPTG FDPTELYKSR 180
  181 NHPRGLQVTI FAATDAIRST GLEWDAILDK ISPDEVGTYS ASIAGQMHDE GFGGLVKSRL 240
  241 TGSRVSSKQL ALGLNTMSTD FINAYVTGNV GTTFTSSGAC ATFLYNLRAA THDMAAGRTR 300
  301 IAIVGSSEAP ITPEMIEGFG NMSALANEEG LKKLDGTDTA DHRRTSRPFG QNCGFTMGEG 360
  361 AQFVVLMDDA LALEMGAKVL GSVADVFINA DGYKKSITAP GPGNYITMAK SVALAEQVLG 420
  421 KEALQERSFI LAHGSSTPQN RVTESLIYHK VAECFNIENW PVAAPKAYIG HTLGPASGDQ 480
  481 MAMALGIFSD NIMPGITTID EVAEDVHNEH LNIATDHWHC PDMDIAFINS KGFGGNNATA 540
  541 TVFSPKVSLS MMEKRYGAEA MATYQQKLIE VEQAQQVYRD NANDGQFDLI YKFGEGLIDE 600
  601 ANIELTNDSL RFTEFKNSIA LPSKNPFDDM V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle