YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71279524, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNRLAALLA SWFPDKDSCQ WVLASIIETQ RSSYRKSGAM MLINSLGKSY GLLSGGCLEA  60
   61 DLMRQAQKCW HQNSNITVCY DMQDDSDIAW QLGIGCGGLV KVLLQPINHD NNYLDLLTLK 120
  121 SQLDNRNACF YHIDTLNTQN TSVSNNQVLS KSVSSLEPLI TIKPSPALVI FGGGVDAQPL 180
  181 VKIAQTLGWF ICLIDCRTAY ARAAYFKEAD IVINQDYTSL EKNLVLPKAD AIVIMHHNVS 240
  241 LDAHALQLVK NQENLAAASY IGLLGPQHRT EKVLKKAQLN STDLPNKLAN KLANPIGFDL 300
  301 GGDLPESIAL AILSQAHATL EQASGNSLGY FQSQITNNIK QVISHAG

Type	Start	End	Confidence
Signal Peptide	1	19	0.80
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	347	0.99