YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71279518, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYLVTGAAG FIGSAVVERL CAAGHDVVGI DNINDYYDIA LKQARLARIE HASFSFIKMD  60
   61 IADRNVMAEL FTAQQFDKVV HLAAQAGVRY SIENPMAYAD SNLIGHLNVL EGCRNNQVKH 120
  121 LIYASSSSVY GLNNKVPFST KDTVDHPVSL YAATKKSNEL MAHSYSHLYN IPTTGLRFFT 180
  181 VYGSWGRPDM APYIFTKKIL NGDTIDINNN GDMWRDFTHV DDIVEGVIRI ADVIPERDAE 240
  241 WKVESGSPAT SSAPYSVYNI GHGSPISLMD FVKAIEDELG IEAKKNFREM QPGDVYQTYA 300
  301 DTQDLFKATN YVPKISVKEG VAELVVWFKD FYKI

Type	Start	End	Confidence
Signal Peptide	1	22	0.83
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	334	0.99