YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71145162, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVFIRLICL LKPQLPLMLL GALLSVITVL ANISLLAVSG WFITLMAIAG TTGITVNYFT  60
   61 PAAIIRFLAI VRTAGRYAER MLTHRATFNA LAHLRHYFYQ QLEPLLPYYR INLRSGDLLA 120
  121 RLQQDIDNLD NFYLRVLLPI VVALISVPIV CYALAIFSPT IAWVMLAAFL IVGLVFPVIS 180
  181 YLASTILSQE KSHLESHLTE ELVNGIGAIK TLLVYQVSIS YQRSIANITK QYYGVRYRLV 240
  241 KINARLTAII FLLIHLSALA CLLLLLPQLS TGEVDSKSLV AVILLVLVSF ETVSSMPLAL 300
  301 QLLPQSLASA ARLFAIIDKE IPVDIGVERV KHGDIHFENF TFSYPEKKTP SLIDINLSIK 360
  361 AGEKVAIIGA SGAGKSTLVN LLMGFWPTGQ ALSSINASFN SLTNPSSNAT ESKNNKGRIT 420
  421 IADCDLSLIE HESLRQHIAL MSQQGHIFEA SIADNLRLAK HDATHEEMRK VCQLVNIIDF 480
  481 IEGLPKGLDT WLGTSGAGLS GGQAQRLQIA QLLLRSASVL ILDEPTKGLD RHNEEQIMRN 540
  541 ILAHVKQQQQ SLLVITHKPL MLEKMDKIIV MQQGEIVAQG SHSQLVNNND YYQKLLNYF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle