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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71145104, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKFLPMKSY LTMNFTKIIT TCLLVTSGMA SGTTDTERPN ILAIWGDDIG QSNISAYTHG  60
   61 MMGYKTTNID RIAKEGVLFT DYYGENSCTA GRAAFITGQY PVRTGLTKVG LPGSDKGLRA 120
  121 EDVTIAELLK DRGYVTGQFG KNHLGDKDEF LPTNHGFDEF LGNLYHLNAE EEPEHPDYPK 180
  181 DQAYKKRFGP RGVIHSFADG KIEDSGPLTK KRMETIDDEF LAATTKFIDK AHKNNKPFFV 240
  241 WFNATRMHIW THLKEESKGL SKRGGIYGDG MMEHDYQVGV LLDQLDRLAI ADNTIVLYTT 300
  301 DNGAEVFSWP DGGTIPFKGE KNTTWEGGFR VPAMVRWPGK ITAGDAKIEM VSHMDWAPTL 360
  361 LAAAGVTDIK EKLKQGTTVN GKKYKVHLDG YNLLPYLTGA TDEAPRPSYL YFTDGGDLSA 420
  421 VRFGDMKLQY SIQECEGLNV WICPLTPLRA PLLTNLRQDP YERARDESGS YERWYVDHIF 480
  481 EFSRGITMTA QQMKTFVEFP PRQKPASWSV DAMVKKIMGM SVPQY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle