YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71279351, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKVLKISGK IIDVLGNFCS LLMILMIINV FYDVIMRYFF NDVSIGMQEL EWHLFAAMFM  60
   61 FGIAYTLKED GHVRVDIFYE TMTAKNQALI NIFGSLVLAL PITILTLYYS WDYTFEAYQM 120
  121 GEGSGDPGGL PHRWIVRSVI PLSSLFLILA IFHVVVTQLK TFTAPTQPET GEQ

Type	Start	End	Confidence
Cytoplasmic	1	13	0.86
Transmembrane Helix	14	32	0.95
Non-Cytoplasmic	33	49	0.85
Transmembrane Helix	50	67	0.94
Cytoplasmic	68	87	0.93
Transmembrane Helix	88	110	0.93
Non-Cytoplasmic	111	133	0.95
Transmembrane Helix	134	156	0.90
Cytoplasmic	157	173	0.95