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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71279318, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSQCFHCNE AVPHGINLSV EISQIQQPMC CIGCQAVAQT IVDNGLTKYY AVRTEPAHKG  60
   61 QSLVPEQLQK NKLLDEAILQ TEFIYQDNDC KEAILTIDGI SCAACAWLIE MQLEKLKGLV 120
  121 KINVNATSQR ATVRWQDDAL KLSEILQAIE HIGYQALPFK ANEAELRNKK QSKAFIKRLG 180
  181 ISGILMMQIM MIAFGLYFGA FSEMAEHNKV YLRWVSFILT IPIIFYGALP FYTGAIKAIK 240
  241 AKRLSMDVPV SIAILLAFSA SAWATITQQG EVYFESVSMF TFLLLIGKFL EFRARSHAAQ 300
  301 VSANLLKLMP MTATKVIVSS DNIVKETQNN ESQTREVLVA AKQLIQGDLV IIKPGEVVPA 360
  361 DGVILSGLSQ LNEAMLSGEQ VPISKTINDN VFAGTLNGDG NITVQVKQAT NQSFLSQLIR 420
  421 LSEEAQAHKP KIAKLSDKIA QYFVALILLT SIATAIYWQQ HMPEEAFWIT LSVLVATCPC 480
  481 ALSLATPTAL TCATTHLNRA GIMIKGGHVM ETMPKIDCFA FDKTGTLTTG EFTIDRVELI 540
  541 NNDSSYNQGQ ILAIAAALEA HSEHPIAKPF AEHRDYNLTA QEVKVHSGQG VTGTINTIDY 600
  601 AIGKYSWLEN SLAEEDGQAK SLKINVNGAS CILIANKEII AVFYLIDKIR DEAFEVISEL 660
  661 NNHNKTLLLS GDSQIACDTI AQTLPVNTVL GGLSAQDKME QIKQVQAQGY TVAMAGDGVN 720
  721 DSPVFGAAHI SIAMGCGADI TKSGADVILL NNKLNSIDTL IKVAHRTRRI ILQNYLWAFG 780
  781 YNAIVLPLAV AGYITPYMAV IGMSASSILV ITNSLRLLKK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle