YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71279293, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQILILGSAA GGGFPQWNCH CANCKGLRAG TIKATPRTQS SIAVSPDGKN WALINASPDI  60
   61 RQQINQSPQL WPEQGARGTN IRGAILTDSQ IDHTTGLITL REGLPLDVYC SHVVYEDLTS 120
  121 AYPLFNMLEH WHGGLSFKPI GYQQSDAFSV EGVADIEFVP VTIESNAPPY SKYRDKVVAG 180
  181 NNIGLKIVDK TSGKYLFYLP GIVESTPEVE EILADASCVL IDGTLWLDDE MIAQGVGTKL 240
  241 GSQMGHMPVN GDFGTVALLN KFDIDRKILI HINNTNPILN EESAQHQFVL DNGVEIAVDG 300
  301 MEITI

Type	Start	End	Confidence
Signal Peptide	1	21	0.90
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	305	0.99