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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71279281, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNHNDLKVA LIALLQQLGL HSQANSISVD TRLDKLDTTE LLDVLRKYSL NFHVRPMNKK  60
   61 DIDHTLLPFL VIPQEDEAFV SRRKNNQYEQ LTSEQSWQRV SFRKDFEQAK VIIIENLPTK 120
  121 KSSSKTFSQH LSKQKKWYKP VFWLSLLSSL TGLAVPLFTM SVYDRVIGGQ APDVLPQIAL 180
  181 GAFIALAILI GSRLIRAKIV ASASNKFARD LSDITFSRLL RMPLMVLSRV GLSNHIARMR 240
  241 NAEKVRGMVS GPGGAGLIDL PFTIIAFSAI ALLSGWLVLV PIIMLFVYYL VMKLLNRYTA 300
  301 RVVPTINSEY QNSINELSKN VLQLKASGQT EARRVEFFRQ CRESCRQNFL FAKRNGLKTA 360
  361 TAHALSMLTA LATVFTGIFL VLNQSITAGA LIACVMLIWR ITGPAQLAFS SGQKFTMMSG 420
  421 AIQQFDRFMG ASPEQNEYRM EQPDRETAPT IKINQITLRY SANQEPVLSG VSADIESGDC 480
  481 VAVIGPNACG KTSLLLSLLG VVEPQAGFIM VNNKNLKQYD PETFREYAGY CPAEPDLFPG 540
  541 TLADNLRIAK PDATDEELIA ALKHAGGESL FIALNSNLNI MLENNASNML SAVEGSYINL 600
  601 ARAFLKKSNF IILDEPLANR NPQARKAFSN TILALKGKAT IVFSSHDPEL IKLADKVIVL 660
  661 DKGSVVYAGP IPEKNSQEME SSNHE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle