YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71144889, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFNKMKNYK GFTAVKELWL LNLFILSVFT LSFSVSAASN DVSINNNELI GISYNTIQSD  60
   61 QIVVVFSFTK NITSLPIVKT SMTPAFVEVT FDANTYGKDL TETLINHAGI KGINLDAKTG 120
  121 KVVALISLEK LAVFDVSLNN EKEFSITFNY GESAEIVETL SPAGDDFINS IESIDFRLNG 180
  181 DNEGQILVYL KDSMLAADVN DKLGKLNVEF HNTEIIDDLL YKLDVTDFGT LVTSIETFKE 240
  241 GRNARLVIDV ESGFIFTQKQ EENLFILTVK KKPEKAPTYL GDTDDFTGRS ISLSFQDIPV 300
  301 RTVLQIIADY NEFNLIISDT VTGNITLRLD GVPWDQALSI ILKVKGLDKR MQGNILMVAP 360
  361 SDELAAREAQ SLQAKQQVEE LATLYSEYLQ INYAKAAEFS ELIKNEDTSI LSDRGSVSVD 420
  421 ERTNTLLIRD TAKSIEDIKR MITILDVPVR QVVIEARMVT VKDNMNEELG IRWGVTNTDG 480
  481 EFATSGSIEG ASSANGTRGV TTPGVGQVPT IGDGLNVNLP VANAAGTIAF QVARLANGTI 540
  541 LDLELSALEK ENKGEVIASP RITTANQKEA YIEQGVEIPY QEAASSGATA TQFKKAVLSL 600
  601 TVTPHITPDD KIILDLVVTQ DTISDITSGF APAIDTQRIG TQVLVNNGET IVLGGIYQQA 660
  661 IISTVSKIPI LGDIPYLGWL FRNSSQLNEK KELLIFVTPR IVTEHF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle