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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71144778, gi|...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSQRLYQIV KTFLNFGLDE MVPADMLPWY ANVGRHSLFW LRNKHKDKTP EQRFRLAIES  60
   61 LGPVFIKFGQ MLSTRRDLLP PELADELALL QDKVTPFDGE QARQLIIDAM GIDVFEQHFK 120
  121 DFDLVPLASA SIAQVHTATL LTAEKNENIV IKVLRPNISK TILADIKVMS LFAGVVARWL 180
  181 PDGKRLRPKE VVEEYRKTIL DELDLNREAA NAIQLKRNFE QGSEYDKALY VPEIYSEYSF 240
  241 ENVLVMERIY GIGVGEIETL NQLGVNMKLL AERGVEVFFT QVFRDSFFHA DMHPGNVFVD 300
  301 ATHPEDPTWI AIDCGIVGTL NREDKRYLAE NFVAFFNRDY RKVAQLHVDS GWVPANTSVD 360
  361 EFEFAIRTVC EPIFNKPLSE ISFGQVLVNL FNTARRFNME VQPQLVLLQK TLLYIEGLGR 420
  421 QLYPQLDLWQ TAKPFLENWV KEQMGVKAVL SKIKANLPFW NEKLPEMPDL IYDYLKTSRE 480
  481 NQHQQTQIMQ TLLASQSKNN QRIIYSIVAA AIIIAGAILL SH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle