YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71279030, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDSFSKPTN SVARSMLKTA DIFEAIILKV SAVCCWSSAL LIAVIILNVT MRYGFNNGLI  60
   61 LFEEIQWHLY AIGIMFGLSY AEITNSQVRV DVVASMLKPK TVLKWEIFGA VFFIFPTIFV 120
  121 ILFNSFDYVA NSYMLGESSS SPLGMPFRWA IKAAIPASFI LLAMAVLARM FRNIITITQK 180
  181 ET

Type	Start	End	Confidence
Cytoplasmic	1	24	0.98
Transmembrane Helix	25	47	0.90
Non-Cytoplasmic	48	66	0.84
Transmembrane Helix	67	84	0.95
Cytoplasmic	85	104	0.85
Transmembrane Helix	105	126	0.91
Non-Cytoplasmic	127	148	0.93
Transmembrane Helix	149	171	0.89
Cytoplasmic	172	182	0.96