YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71278903, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIFITISK TTELIEQYIV CYSILLMMVN STANAIGRYA FGKSLFFAEE LNQFLIVTIT  60
   61 FVGFAYAVRK GRNIRMTAVY DSLGYYAKKV ITTLISITTG LLMFYLAYKA IFYVIELKDL 120
  121 NRLSPALQFP VYIIYSIIPL GLGIAGLQYL IAFFLNITHK EIYISREVVE KGEPS

Type	Start	End	Confidence
Cytoplasmic	1	17	0.95
Transmembrane Helix	18	40	0.88
Non-Cytoplasmic	41	50	0.80
Transmembrane Helix	51	69	0.93
Cytoplasmic	70	89	0.89
Transmembrane Helix	90	108	0.95
Non-Cytoplasmic	109	131	0.86
Transmembrane Helix	132	155	0.90
Cytoplasmic	156	175	0.94