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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71144610, gi|...
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKKAAKNNN PLNTAPWRYY LVLAVVALIY ISLMARTAYI QIIEPEMLKK QGDLRSLRVA  60
   61 ANTVQRGSIV DRNGAELAIS VPVETVWADP KIIMDNNAIA MTKHWQALAD VLDQDINKLI 120
  121 ARVVKNPRKR FIYLERKISP AMASYIKELK IPGIHLRKES KRFYPTGEIS AHLIGFTNVD 180
  181 DKGIEGIERM YDDLLTGTGG AKRFRKDAKG RKIEIISVEE PEQAQDITLS IDQRIQAIAY 240
  241 KELKGAVQAF KATSGSVVVA NIHTGEILAM TNSPSYNPNN RRNTAIHRFR NRAITDIYEP 300
  301 GSTMKPLTAL TALEFGSAKA NSIINTSPGW MRLGGRRVSD PINRGKLSIE EILVTSSNMG 360
  361 TTKLALSVPK DYLLTKFFDA GFADDTGTNL VGESVGMMHD RSRWSKFELA TLSWGAGLAI 420
  421 TPAQLTRFYM ALANGGIKRK LTIVKSSDKT TDPEDQERIF SAKNSLAITH MLEAVVDEHV 480
  481 PKAKIDGYRV GGKTGTSIKA VAGGYGNDYV ALFAGIAPIS NPEIVVVVVI NEPSGDLYHG 540
  541 GEVAAPVFSR VMKGALRVLN VAPDAQKSRT ASKHIKLTHP AQKPVAGEHH A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle