YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71278847, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKQRPVNLD LTTIKMHPAA NASILHRVSG VIMVFAIGIL LFTLSTSLSS AEGFAQIQGY  60
   61 LDGFFFKFII FGCLSALTFH VLAGVRHLLM DLGHFEELAS GNATAKLIMV IWLAVSAVIG 120
  121 VWLW

Type	Start	End	Confidence
Cytoplasmic	1	23	0.93
Transmembrane Helix	24	45	0.90
Non-Cytoplasmic	46	63	0.83
Transmembrane Helix	64	84	0.93
Cytoplasmic	85	102	0.80
Transmembrane Helix	103	123	0.93
Non-Cytoplasmic	124	124	0.95