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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71144549, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLMNTNSRK ILFISISVTL FTMAIVYYSF LIGRDIAERY TPLVDATMEI KLEATTAHLW  60
   61 FEEMMSGDQT VDIETIWANL DQSEWYAQAM LDGGTNEEGT FLALNDPDLR SQIEETIDGI 120
  121 HHFRQIAKKR WASQSTSGVG SGIEQQFDLA FLKFNLSTDN VESALQKVRA EDLQTFKFTQ 180
  181 VLLITLLLIL GIIIGGLSLR FNNKRIKNID VLKLSNENVN SSQKQLLNVI NGAKLGYWDW 240
  241 CYQTGEHVVN DEWLSILGLS RQDITNHISD WDGLIHPNDD QFMKKTVQTH ILSGKNYVVE 300
  301 FRMKHADGRW VWIQGSGSVI EYDENTHEPV RLCGTHQDIT VRKLAELREK SRSHVLELLT 360
  361 SGDLLPVILE AIVRGVEQEN SDMLCSILLL DDEGKHLLSG AAPSLPDFYN SAINGIEIGV 420
  421 GVGSCGTAAF TNKRVIVEDI QNHPYWTPYK ELASKAGLGA CWSEPIRSTQ GKILGTFAIY 480
  481 HLEVNKPTEA NMTLIEQAAS LASIAIEKIQ ANLALKASDE QMQLVLAGAD LGFWDWNIVT 540
  541 GRVDRNERWA TMLGYTHKEL KHSTNQWADF VHQEDREKAW QSINDVLEGR SKSHSLEYRM 600
  601 LTKEGGYRWV HDQANVMQRH SNGKPLRMSG THSDITNRKL AEEKIKLAAS VFSHAGEGII 660
  661 ITDDKATIID INDAFTNITG FSREEAIGKN PRILQSGRQT PEFYADMWQA LQNEGYWSGE 720
  721 VWNRRKNGEV YAVMQTISAV RDVHGIATHY VSLGNDITLM KEHQNQLEHI AHFDILTNLP 780
  781 NRVLLADRLS QAMLQCSRHK QSLAVVFLDL DGFKHVNDTH GHDIGDELLI ALSVRMKEAL 840
  841 RENDSLARIG GDEFVAVLAD LTTVEDCEPV LERLLLAASE PVIFDNIVLN ISASIGVTLY 900
  901 PQDNVGADLL MRHADQAMYV AKESGKNRYH LFDTAQDDAV KVQRESLEAI RSALDNHQFV 960
  961 LHYQPKVNMR KGIVTGVEAL IRWQHPKRGL LNPIEFLPVI ENNPMSIEMG EWVIDTALTQ1020
 1021 ISQWQKLGLN FPVSISVNIA ALQLQQPDFT DRLMILLAAH PDVEPHYLEL EVLETSALED1080
 1081 VYNVSTIMNA CMALGVNFAL DDFGTGYSSL TYLRRLPANL IKIDQSFVRD MLHDSDDLAI1140
 1141 VEGVIALAKS FKRDVIAEGV ETIEHGTALL QLGCELAQGY GIARPMPASE IPTWISDWKP1200
 1201 DVNWQN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle