YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71278801, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.58
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTINRLNQT EAKTIIDGAV NKANELGVPM CIAVVDESGN LIAFERMDGG KVHSITISQD  60
   61 KAFTAASARK GTHEFNKACI PGHKNNLFGI HTALGGRMCI VGGGLPITFN GSVVGGIGVS 120
  121 SGSPEQDLGC AQAGVDSFSK TYG

Type	Start	End	Confidence
Cytoplasmic	1	93	0.55
Transmembrane Helix	94	109	0.50
Non-Cytoplasmic	110	143	0.88