YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71144520, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGKNTKVNF NLANPVQFLA LGFGSGLAPK APGTFGTLAA VPLFLLMSGL SPLLYGSLVF  60
   61 IVCIAGIYIC GKAASDVGVH DHGAIVWDEF AGFFITMFMI PVSWQSVLVG FILFRIFDIA 120
  121 KPWPISVADK KLTGGFGIMF DDVLAGLFAL GIMHIIF

Type	Start	End	Confidence
Non-Cytoplasmic	1	18	0.56
Transmembrane Helix	19	46	0.61
Cytoplasmic	47	52	0.52
Transmembrane Helix	53	75	0.82
Non-Cytoplasmic	76	91	0.79
Transmembrane Helix	92	114	0.92
Cytoplasmic	115	131	0.79
Transmembrane Helix	132	156	0.86
Non-Cytoplasmic	157	157	0.86