YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71144503, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTFYKGYQN YHYRVSYLAI KANKQAGVVL IVSLIFLIAL TAVASALMLN TTTDMKMSGA  60
   61 SEMKVVAEQE VFGAMDELIF REVLHGVGES NAFALPVSRL ANAIPVLANL TSSNTDGNVT 120
  121 NATISLADNP LLLEKTCPHS RAASSVQVFT CNILRVQITK QYGRNNNSTI TVNSGIAQQL 180
  181 LK

Type	Start	End	Confidence
Cytoplasmic	1	25	0.63
Transmembrane Helix	26	49	0.82
Non-Cytoplasmic	50	182	0.70