YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71278728, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELLYASCVG ILVSCGVFLI LRSRTFPVVL GLTMLSYAVN LFLFSSGRLS LNKAAVLGTS  60
   61 PQYADPLPQA LVLTAIVIGF AMTAFVVILA IRGRADLGSD HVDGLVLDKN SDKNNDKNKK 120
  121 GKV

Type	Start	End	Confidence
Cytoplasmic	1	27	0.50
Transmembrane Helix	28	47	0.80
Non-Cytoplasmic	48	69	0.80
Transmembrane Helix	70	91	0.93
Cytoplasmic	92	123	0.91