YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71278613, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILLLSGGV GGAKMAEGLY HSEYGNELSV IGNVADDMLF HGLWVSPDID TLTYTLADLI  60
   61 DTKKGWGLKD ETTNTLEALE RLGCDTWMYL GDKDFATHIY RTQQKQSGIR PSVIAKHIAK 120
  121 QLGVTANILL PTDQVIQNRI HTEQGWLDFQ SYFVKKGCQP EILDIFVSGI EDAQPTPESL 180
  181 KAINEADLII IAPSNPIVSI NPIVNVPGIR AALKSSKAPV VAVSPMINGK TVKGPADRMM 240
  241 AAMNFSSDVL GVANCYQGLI DGFVIDIEDQ QFTSVLEASG LKVMVAQTLM KNRIDKVSLA 300
  301 ENVVAEMSTK FGLKCGTQLA EEV

Type	Start	End	Confidence
Signal Peptide	1	16	0.79
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	323	0.99