YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71144307, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTFLLVSAF ANTAFSNTVL AKDVPFAIAI HGGAGTIQKD HFTPEKEAAY RAKLKESVEA  60
   61 GYTVLEQGGT SLDAVATAIN VLENSPFFNA GKGAVYTHDE THEMDASIMD GKNRQAGAVA 120
  121 GVKHIENPIN LARLVMDESV HVMLSGAGAE SFAHSQGVKL VDNKIFDTDH RYKSLQRAKA 180
  181 KMKKAKQQNK DYQAAHFALD TEYKVGTVGA VALDKFGNVA AGTSTGGMTN KRYGRIGDSP 240
  241 VIGAGTFADN ASCAVSATGH GEFFIRYNVA ADICARVQYQ GKSIDQAGKE VIHDVLMPVG 300
  301 GTGGVIIIDS KGNISLPFNT KGMYRASKST SQVTYVGIFK DD

Type	Start	End	Confidence
Signal Peptide	1	21	0.94
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	342	0.99