YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71278555, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNLSELAIR QRGFTLIEVM VVVVLIGLMA SLVQFNFSGN NPEDKLKHES ARFAAIFEVA  60
   61 AEYGMLNNIE LGLIVKKDSY QFVGYDGTKW AEIPEQDWQA NVTVPEEIEL SIELDDLPIE 120
  121 EPMLFDADTF KEKDEDDFTL LSKEEREEKI IPQVYILSGG DLSPFSVTFR LTEELAYIEG 180
  181 AEDLAYRVTG LYNVPLTIEG PVLDDD

Type	Start	End	Confidence
Cytoplasmic	1	12	0.93
Transmembrane Helix	13	33	0.92
Non-Cytoplasmic	34	206	0.97